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BlazeGraph stack trace during munged file import, obtained from screen backscroll
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Authored by dr0ptp4kt on Apr 3 2024, 7:52 PM.
at com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:99)
at com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3932)
at com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertCommit(AST2BOpUpdate.java:375)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertUpdate(AST2BOpUpdate.java:321)
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1072)
... 9 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5425)
at com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3896)
at com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:780)
at com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3500)
at com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3301)
at com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4111)
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3132)
... 15 more
Caused by: java.lang.RuntimeException: addr=-151834637 : cause=java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, write
CacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2399)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2120)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2685)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2700)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5341)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5411)
... 21 more
Caused by: java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, writeCacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2321)
... 30 more
Caused by: com.bigdata.util.ChecksumError: offset=704140099584,nbytes=16,expected=-154356869,actual=543360410
at com.bigdata.io.writecache.WriteCacheService._readFromLocalDiskIntoNewHeapByteBuffer(WriteCacheService.java:3783)
at com.bigdata.io.writecache.WriteCacheService._getRecord(WriteCacheService.java:3598)
at com.bigdata.io.writecache.WriteCacheService.access$2500(WriteCacheService.java:200)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3435)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3419)
at com.bigdata.util.concurrent.Memoizer$1.call(Memoizer.java:77)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at com.bigdata.util.concurrent.Memoizer.compute(Memoizer.java:92)
at com.bigdata.io.writecache.WriteCacheService.loadRecord(WriteCacheService.java:3540)
at com.bigdata.io.writecache.WriteCacheService.read(WriteCacheService.java:3259)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2315)
... 30 more
SPARQL-UPDATE: updateStr=LOAD <file:///mnt/firehose/munge_on_later_data_set/wikidump-000001304.ttl.gz>
java.util.concurrent.ExecutionException: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem
with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wedne
sday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024
7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555,
quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=16003356
92, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:206)
at com.bigdata.rdf.sail.webapp.BigdataServlet.submitApiTask(BigdataServlet.java:292)
at com.bigdata.rdf.sail.webapp.QueryServlet.doSparqlUpdate(QueryServlet.java:460)
at com.bigdata.rdf.sail.webapp.QueryServlet.doPost(QueryServlet.java:241)
at com.bigdata.rdf.sail.webapp.RESTServlet.doPost(RESTServlet.java:269)
at com.bigdata.rdf.sail.webapp.MultiTenancyServlet.doPost(MultiTenancyServlet.java:195)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1655)
at org.wikidata.query.rdf.blazegraph.throttling.ThrottlingFilter.doFilter(ThrottlingFilter.java:320)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.throttling.SystemOverloadFilter.doFilter(SystemOverloadFilter.java:82)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at ch.qos.logback.classic.helpers.MDCInsertingServletFilter.doFilter(MDCInsertingServletFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.QueryEventSenderFilter.doFilter(QueryEventSenderFilter.java:110)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.ClientIPFilter.doFilter(ClientIPFilter.java:43)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.JWTIdentityFilter.doFilter(JWTIdentityFilter.java:66)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RealAgentFilter.doFilter(RealAgentFilter.java:33)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RequestConcurrencyFilter.doFilter(RequestConcurrencyFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1634)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146)
at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1340)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1242)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144)
at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:220)
at org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:503)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:364)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:260)
at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:118)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126)
at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:765)
at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:683)
at java.lang.Thread.run(Thread.java:750)
Caused by: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -832899127695110
02: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM
CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounte
r=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=
26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [
Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:571)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:472)
at com.bigdata.rdf.task.ApiTaskForIndexManager.call(ApiTaskForIndexManager.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0,
challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Fri
day, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140
859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126
, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], c
loseTime=0}
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1080)
at com.bigdata.rdf.sail.BigdataSailUpdate.execute2(BigdataSailUpdate.java:152)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$UpdateTask.doQuery(BigdataRDFContext.java:2003)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.innerCall(BigdataRDFContext.java:1579)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:1544)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:757)
... 4 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47
806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCom
mitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=
NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434
-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3134)
at com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:99)
at com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3932)
at com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertCommit(AST2BOpUpdate.java:375)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertUpdate(AST2BOpUpdate.java:321)
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1072)
... 9 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5425)
at com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3896)
at com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:780)
at com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3500)
at com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3301)
at com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4111)
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3132)
... 15 more
Caused by: java.lang.RuntimeException: addr=-151834637 : cause=java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, write
CacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2399)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2120)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2685)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2700)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5341)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5411)
... 21 more
Caused by: java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, writeCacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2321)
... 30 more
Caused by: com.bigdata.util.ChecksumError: offset=704140099584,nbytes=16,expected=-154356869,actual=543360410
at com.bigdata.io.writecache.WriteCacheService._readFromLocalDiskIntoNewHeapByteBuffer(WriteCacheService.java:3783)
at com.bigdata.io.writecache.WriteCacheService._getRecord(WriteCacheService.java:3598)
at com.bigdata.io.writecache.WriteCacheService.access$2500(WriteCacheService.java:200)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3435)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3419)
at com.bigdata.util.concurrent.Memoizer$1.call(Memoizer.java:77)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at com.bigdata.util.concurrent.Memoizer.compute(Memoizer.java:92)
at com.bigdata.io.writecache.WriteCacheService.loadRecord(WriteCacheService.java:3540)
at com.bigdata.io.writecache.WriteCacheService.read(WriteCacheService.java:3259)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2315)
... 30 more
SPARQL-UPDATE: updateStr=LOAD <file:///mnt/firehose/munge_on_later_data_set/wikidump-000001304.ttl.gz>
java.util.concurrent.ExecutionException: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem
with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wedne
sday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024
7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555,
quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=16003356
92, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:206)
at com.bigdata.rdf.sail.webapp.BigdataServlet.submitApiTask(BigdataServlet.java:292)
at com.bigdata.rdf.sail.webapp.QueryServlet.doSparqlUpdate(QueryServlet.java:460)
at com.bigdata.rdf.sail.webapp.QueryServlet.doPost(QueryServlet.java:241)
at com.bigdata.rdf.sail.webapp.RESTServlet.doPost(RESTServlet.java:269)
at com.bigdata.rdf.sail.webapp.MultiTenancyServlet.doPost(MultiTenancyServlet.java:195)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1655)
at org.wikidata.query.rdf.blazegraph.throttling.ThrottlingFilter.doFilter(ThrottlingFilter.java:320)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.throttling.SystemOverloadFilter.doFilter(SystemOverloadFilter.java:82)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at ch.qos.logback.classic.helpers.MDCInsertingServletFilter.doFilter(MDCInsertingServletFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.QueryEventSenderFilter.doFilter(QueryEventSenderFilter.java:110)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.ClientIPFilter.doFilter(ClientIPFilter.java:43)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.JWTIdentityFilter.doFilter(JWTIdentityFilter.java:66)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RealAgentFilter.doFilter(RealAgentFilter.java:33)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RequestConcurrencyFilter.doFilter(RequestConcurrencyFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1634)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146)
at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1340)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1242)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144)
at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:220)
at org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:503)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:364)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:260)
at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:118)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126)
at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:765)
at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:683)
at java.lang.Thread.run(Thread.java:750)
Caused by: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -832899127695110
02: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM
CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounte
r=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=
26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [
Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:571)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:472)
at com.bigdata.rdf.task.ApiTaskForIndexManager.call(ApiTaskForIndexManager.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0,
challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Fri
day, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140
859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126
, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], c
loseTime=0}
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1080)
at com.bigdata.rdf.sail.BigdataSailUpdate.execute2(BigdataSailUpdate.java:152)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$UpdateTask.doQuery(BigdataRDFContext.java:2003)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.innerCall(BigdataRDFContext.java:1579)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:1544)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:757)
... 4 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47
806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCom
mitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=
NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434
-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3134)
at com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:99)
at com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3932)
at com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertCommit(AST2BOpUpdate.java:375)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertUpdate(AST2BOpUpdate.java:321)
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1072)
... 9 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5425)
at com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3896)
at com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:780)
at com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3500)
at com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3301)
at com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4111)
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3132)
... 15 more
Caused by: java.lang.RuntimeException: addr=-151834637 : cause=java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, write
CacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2399)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2120)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2685)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2700)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5341)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5411)
... 21 more
Caused by: java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, writeCacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2321)
... 30 more
Caused by: com.bigdata.util.ChecksumError: offset=704140099584,nbytes=16,expected=-154356869,actual=543360410
at com.bigdata.io.writecache.WriteCacheService._readFromLocalDiskIntoNewHeapByteBuffer(WriteCacheService.java:3783)
at com.bigdata.io.writecache.WriteCacheService._getRecord(WriteCacheService.java:3598)
at com.bigdata.io.writecache.WriteCacheService.access$2500(WriteCacheService.java:200)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3435)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3419)
at com.bigdata.util.concurrent.Memoizer$1.call(Memoizer.java:77)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at com.bigdata.util.concurrent.Memoizer.compute(Memoizer.java:92)
at com.bigdata.io.writecache.WriteCacheService.loadRecord(WriteCacheService.java:3540)
at com.bigdata.io.writecache.WriteCacheService.read(WriteCacheService.java:3259)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2315)
... 30 more
Wed Apr 3 02:05:26 PM CDT 2024
Processing wikidump-000001305.ttl.gz
SPARQL-UPDATE: updateStr=LOAD <file:///mnt/firehose/munge_on_later_data_set/wikidump-000001305.ttl.gz>
java.util.concurrent.ExecutionException: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem
with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wedne
sday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024
7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555,
quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=16003356
92, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:206)
at com.bigdata.rdf.sail.webapp.BigdataServlet.submitApiTask(BigdataServlet.java:292)
at com.bigdata.rdf.sail.webapp.QueryServlet.doSparqlUpdate(QueryServlet.java:460)
at com.bigdata.rdf.sail.webapp.QueryServlet.doPost(QueryServlet.java:241)
at com.bigdata.rdf.sail.webapp.RESTServlet.doPost(RESTServlet.java:269)
at com.bigdata.rdf.sail.webapp.MultiTenancyServlet.doPost(MultiTenancyServlet.java:195)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1655)
at org.wikidata.query.rdf.blazegraph.throttling.ThrottlingFilter.doFilter(ThrottlingFilter.java:320)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.throttling.SystemOverloadFilter.doFilter(SystemOverloadFilter.java:82)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at ch.qos.logback.classic.helpers.MDCInsertingServletFilter.doFilter(MDCInsertingServletFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.QueryEventSenderFilter.doFilter(QueryEventSenderFilter.java:110)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.ClientIPFilter.doFilter(ClientIPFilter.java:43)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.JWTIdentityFilter.doFilter(JWTIdentityFilter.java:66)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RealAgentFilter.doFilter(RealAgentFilter.java:33)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RequestConcurrencyFilter.doFilter(RequestConcurrencyFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1634)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146)
at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1340)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1242)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144)
at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:220)
at org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:503)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:364)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:260)
at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:118)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126)
at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:765)
at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:683)
at java.lang.Thread.run(Thread.java:750)
Caused by: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -832899127695110
02: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM
CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounte
r=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=
26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [
Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:571)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:472)
at com.bigdata.rdf.task.ApiTaskForIndexManager.call(ApiTaskForIndexManager.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0,
challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Fri
day, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140
859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126
, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], c
loseTime=0}
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1080)
at com.bigdata.rdf.sail.BigdataSailUpdate.execute2(BigdataSailUpdate.java:152)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$UpdateTask.doQuery(BigdataRDFContext.java:2003)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.innerCall(BigdataRDFContext.java:1579)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:1544)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:757)
... 4 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47
806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCom
mitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=
NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434
-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3134)
at com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:99)
at com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3932)
at com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertCommit(AST2BOpUpdate.java:375)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertUpdate(AST2BOpUpdate.java:321)
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1072)
... 9 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5425)
at com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3896)
at com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:780)
at com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3500)
at com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3301)
at com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4111)
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3132)
... 15 more
Caused by: java.lang.RuntimeException: addr=-151834637 : cause=java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, write
CacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2399)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2120)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2685)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2700)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5341)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5411)
... 21 more
Caused by: java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, writeCacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2321)
... 30 more
Caused by: com.bigdata.util.ChecksumError: offset=704140099584,nbytes=16,expected=-154356869,actual=543360410
at com.bigdata.io.writecache.WriteCacheService._readFromLocalDiskIntoNewHeapByteBuffer(WriteCacheService.java:3783)
at com.bigdata.io.writecache.WriteCacheService._getRecord(WriteCacheService.java:3598)
at com.bigdata.io.writecache.WriteCacheService.access$2500(WriteCacheService.java:200)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3435)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3419)
at com.bigdata.util.concurrent.Memoizer$1.call(Memoizer.java:77)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at com.bigdata.util.concurrent.Memoizer.compute(Memoizer.java:92)
at com.bigdata.io.writecache.WriteCacheService.loadRecord(WriteCacheService.java:3540)
at com.bigdata.io.writecache.WriteCacheService.read(WriteCacheService.java:3259)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2315)
... 30 more
SPARQL-UPDATE: updateStr=LOAD <file:///mnt/firehose/munge_on_later_data_set/wikidump-000001305.ttl.gz>
java.util.concurrent.ExecutionException: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem
with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wedne
sday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024
7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555,
quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=16003356
92, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:206)
at com.bigdata.rdf.sail.webapp.BigdataServlet.submitApiTask(BigdataServlet.java:292)
at com.bigdata.rdf.sail.webapp.QueryServlet.doSparqlUpdate(QueryServlet.java:460)
at com.bigdata.rdf.sail.webapp.QueryServlet.doPost(QueryServlet.java:241)
at com.bigdata.rdf.sail.webapp.RESTServlet.doPost(RESTServlet.java:269)
at com.bigdata.rdf.sail.webapp.MultiTenancyServlet.doPost(MultiTenancyServlet.java:195)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:865)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1655)
at org.wikidata.query.rdf.blazegraph.throttling.ThrottlingFilter.doFilter(ThrottlingFilter.java:320)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.throttling.SystemOverloadFilter.doFilter(SystemOverloadFilter.java:82)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at ch.qos.logback.classic.helpers.MDCInsertingServletFilter.doFilter(MDCInsertingServletFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.QueryEventSenderFilter.doFilter(QueryEventSenderFilter.java:110)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.ClientIPFilter.doFilter(ClientIPFilter.java:43)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.JWTIdentityFilter.doFilter(JWTIdentityFilter.java:66)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RealAgentFilter.doFilter(RealAgentFilter.java:33)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)
at org.wikidata.query.rdf.blazegraph.filters.RequestConcurrencyFilter.doFilter(RequestConcurrencyFilter.java:50)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1634)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:146)
at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:257)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1340)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1242)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144)
at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:220)
at org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:503)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:364)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:260)
at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:305)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:118)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:333)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:310)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:168)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:126)
at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:765)
at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:683)
at java.lang.Thread.run(Thread.java:750)
Caused by: java.util.concurrent.ExecutionException: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -832899127695110
02: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM
CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounte
r=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=
26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [
Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:571)
at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:472)
at com.bigdata.rdf.task.ApiTaskForIndexManager.call(ApiTaskForIndexManager.java:68)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: org.openrdf.query.UpdateExecutionException: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0,
challisField=1302, version=3, nextOffset=47806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Fri
day, March 29, 2024 1:39:34 PM CDT], lastCommitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140
859033,len=422}, commitRecordIndexAddr={off=NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126
, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], c
loseTime=0}
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1080)
at com.bigdata.rdf.sail.BigdataSailUpdate.execute2(BigdataSailUpdate.java:152)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$UpdateTask.doQuery(BigdataRDFContext.java:2003)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.innerCall(BigdataRDFContext.java:1579)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:1544)
at com.bigdata.rdf.sail.webapp.BigdataRDFContext$AbstractQueryTask.call(BigdataRDFContext.java:757)
... 4 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002: lastRootBlock=rootBlock{ rootBlock=0, challisField=1302, version=3, nextOffset=47
806576684846562, localTime=1712147044389 [Wednesday, April 3, 2024 7:24:04 AM CDT], firstCommitTime=1711737574896 [Friday, March 29, 2024 1:39:34 PM CDT], lastCom
mitTime=1712147041973 [Wednesday, April 3, 2024 7:24:01 AM CDT], commitCounter=1302, commitRecordAddr={off=NATIVE:-140859033,len=422}, commitRecordIndexAddr={off=
NATIVE:-93467508,len=220}, blockSequence=34555, quorumToken=-1, metaBitsAddr=26754033649714513, metaStartAddr=11989126, storeType=RW, uuid=f993598d-497c-46a7-8434-d25c8859a0b8, offsetBits=42, checksum=1600335692, createTime=1711737574192 [Friday, March 29, 2024 1:39:34 PM CDT], closeTime=0}
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3134)
at com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:99)
at com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3932)
at com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertCommit(AST2BOpUpdate.java:375)
at com.bigdata.rdf.sparql.ast.eval.AST2BOpUpdate.convertUpdate(AST2BOpUpdate.java:321)
at com.bigdata.rdf.sparql.ast.eval.ASTEvalHelper.executeUpdate(ASTEvalHelper.java:1072)
... 9 more
Caused by: java.lang.RuntimeException: Problem with entry at -83289912769511002
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5425)
at com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3896)
at com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:780)
at com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3500)
at com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3301)
at com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4111)
at com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3132)
... 15 more
Caused by: java.lang.RuntimeException: addr=-151834637 : cause=java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, writeCacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2399)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2120)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2685)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeImmediateBlob(RWStore.java:2700)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2725)
at com.bigdata.rwstore.RWStore.immediateFree(RWStore.java:2712)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5341)
at com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:5411)
... 21 more
Caused by: java.lang.IllegalStateException: Error reading from WriteCache addr: 704140099584 length: 12, writeCacheDebug: No WriteCache debug info
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2321)
... 30 more
Caused by: com.bigdata.util.ChecksumError: offset=704140099584,nbytes=16,expected=-154356869,actual=543360410
at com.bigdata.io.writecache.WriteCacheService._readFromLocalDiskIntoNewHeapByteBuffer(WriteCacheService.java:3783)
at com.bigdata.io.writecache.WriteCacheService._getRecord(WriteCacheService.java:3598)
at com.bigdata.io.writecache.WriteCacheService.access$2500(WriteCacheService.java:200)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3435)
at com.bigdata.io.writecache.WriteCacheService$1.compute(WriteCacheService.java:3419)
at com.bigdata.util.concurrent.Memoizer$1.call(Memoizer.java:77)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at com.bigdata.util.concurrent.Memoizer.compute(Memoizer.java:92)
at com.bigdata.io.writecache.WriteCacheService.loadRecord(WriteCacheService.java:3540)
at com.bigdata.io.writecache.WriteCacheService.read(WriteCacheService.java:3259)
at com.bigdata.rwstore.RWStore.getData(RWStore.java:2315)
... 30 more
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