Background info: Furigana; Ruby character#HTML markup.
Words annotated with HTML ruby are not searchable in a user-friendly way when HTML formatting is stripped, as the reading becomes inline by default. For example, annotated
To | kyo |
東 | 京 |
becomes inline 東(To)京(kyo), so neither searching for 東京 nor Tokyo would work.
( example of searching for HTML-formatted ruby as proof that this is a problem, another example )