In Wikimedia Gerrit repos, phpDoc reference tags are not sniffed, suggesting that there should be a rule in Wikimedia Code Sniffer tool to handle this. See an example patch: https://gerrit.wikimedia.org/r/c/mediawiki/extensions/MobileFrontend/+/470825.
Also, @Jdlrobson's comment about this: https://gerrit.wikimedia.org/r/c/mediawiki/extensions/MobileFrontend/+/470825/1//COMMIT_MSG#10.