For example in ArticlePlaceholder's extension.json, it should really declare that it depends on some of the Wikibase extensions.
Recently while moving datamodel libraries into Wikibase.git T289040: Migrate DataModel, DataModelServices, DataModelSerialization, WBInternalSerialization to Wikibase.git this dependency should now also be reflected in other extensions, see https://gerrit.wikimedia.org/r/c/mediawiki/extensions/PropertySuggester/+/715017/1/composer.json
This is seemingly currently blocked on T263101: Make mediawiki core installer stop trying to find extensions early and check if they are loaded or not