On wikisource wikis the ProofreadPage extension adds appropriate namespaces directly to $wgContentNamespaces via the onSetupAfterCache hook. This has existed since 2015.
Due to some change in loading order with the 1.44.0-wmf.21 deployment the NamespaceInfo class is now initialized before the ProofreadPage hook handler can run, resulting in NamespaceInfo taking a copy of ContentNamespaces before the namespaces from ProofreadPage have been added. This results in the Page and Index namespaces no longer being considered content namespaces on these wikis.