The $wgCiteRemoveSyntheticRefsUnsafe feature flag is part of our migration away from "synthetic refs", and enabling it on the beta cluster will allow us to have a shared place to review use cases that still rely on the older mechanism. A drawback is that some sub-reference use cases will no longer work on the beta cluster, until we complete the migration.
Demo: visit https://en.wikipedia.beta.wmcloud.org/wiki/CiteDetailsTests?useparsoid=1 and inspecting the HTML will show no synthetic refs.