integration-slave1001 runs tox-1.8.1 while the others run tox-1.7.0, which causes subtle changes in behaviour, which then cause PRs to be OKed or not depending on the host the test runs on.
Ex.
https://integration.wikimedia.org/ci/job/pywikibot-core-tox-nose/3005/console
https://integration.wikimedia.org/ci/job/pywikibot-core-tox-nose/3006/console