Currently, the mainline Dashboard app is themed with Wiki Education Foundation branding and visual identity. The community version running at educationdashboard.wmflabs.org is a fork where I did some simple hacks to change the color definitions and logo file.
However, it'd be much more practical to find a way to include both a general theme and a Wiki Ed theme in the mainline repo and select the theme as part of the configuration for an individual instance.
I'm not sure how to get started with that, especially since the css files are compiled and checked in to the repo.