add "lint:ignore"s for several "puppet URL without modules"
Just adding lint:ignore's and comments. They are also
meant as a question if these should move into a module
or not and what the plan is for files that are actually
used by multiple modules. In other places we don't seem to
mind that modules use files from other modules but we also
don't like the global ./files/misc structure and neither
Fixes several "WARNING: puppet:// URL without modules/ found"