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wikibase.plantdata.io docker-compose.yml docker-compose up (wdqs issue)
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Authored by Addshore on Apr 6 2018, 3:56 PM.
adam@adsh MINGW64 ~/dev/git/github/addshore/wikibase-docker (master)
$ dc up
Creating network "wikibasedocker_default" with the default driver
Creating volume "wikibasedocker_query-service-data" with default driver
Creating wikibasedocker_wdqs_1 ... done
Creating wikibasedocker_wdqs-proxy_1 ... done
Creating wikibasedocker_wdqs-updater_1 ... done
Creating wikibasedocker_wdqs-frontend_1 ... done
Attaching to wikibasedocker_wdqs_1, wikibasedocker_wdqs-updater_1, wikibasedocker_wdqs-proxy_1, wikibasedocker_wdqs-frontend_1
wdqs_1 | /wdqs /wdqs
wdqs_1 | Running Blazegraph from /wdqs on :9999/bigdata
wdqs_1 | OpenJDK 64-Bit Server VM warning: Cannot open file /var/log/wdqs/wdqs-blazegraph_jvm_gc.pid9-2018-04-06_15-54-53.log due to No such file or directory
wdqs_1 |
wdqs_1 | 2018-04-06 15:54:54.423:INFO::main: Logging initialized @533ms
wdqs_1 | 2018-04-06 15:54:54.461:INFO:oejr.Runner:main: Runner
wdqs_1 | 2018-04-06 15:54:54.889:INFO:oejs.Server:main: jetty-9.2.3.v20140905
wdqs-updater_1 | wait-for-it.sh: waiting 60 seconds for wikibase.plantdata.io:80
wdqs-updater_1 | wait-for-it.sh: wikibase.plantdata.io:80 is available after 0 seconds
wdqs-updater_1 | wait-for-it.sh: waiting 60 seconds for wdqs.svc:9999
wdqs_1 | 2018-04-06 15:55:09.175:WARN:oeja.AnnotationConfiguration:main: ServletContainerInitializers: detected. Class hierarchy: empty
wdqs_1 | #logback.classic pattern: %d{HH:mm:ss.SSS} [%thread] %-5level %logger{36} IP:%X{req.remoteHost} UA:%X{req.userAgent} - %msg%n
wdqs_1 | INFO: com.bigdata.util.config.LogUtil: Configure: file:/tmp/jetty-0.0.0.0-9999-blazegraph-service-0.3.0.war-_bigdata-any-1533619962400706239.dir/webapp/WEB-INF/classes/log4j.properties
wdqs_1 | 15:55:10.015 [main] WARN com.bigdata.Banner IP: UA: - Defaulting log level to WARN: com.bigdata
wdqs_1 |
wdqs_1 | BlazeGraph(TM) Graph Engine
wdqs_1 |
wdqs_1 | Flexible
wdqs_1 | Reliable
wdqs_1 | Affordable
wdqs_1 | Web-Scale Computing for the Enterprise
wdqs_1 |
wdqs_1 | Copyright SYSTAP, LLC DBA Blazegraph 2006-2016. All rights reserved.
wdqs_1 |
wdqs_1 | e7ff9d50da59
wdqs_1 | Fri Apr 06 15:55:10 GMT 2018
wdqs_1 | Linux/4.9.87-linuxkit-aufs amd64
wdqs_1 | Intel(R) Core(TM) i7-6600U CPU @ 2.60GHz Family 6 Model 78 Stepping 3, GenuineIntel #CPU=2
wdqs_1 | Oracle Corporation 1.8.0_151
wdqs_1 | freeMemory=232783872
wdqs_1 | buildVersion=2.1.5-SNAPSHOT
wdqs_1 | gitCommit=8ff64aab6071b5e591e80676809e43f0ddb8ad49
wdqs_1 |
wdqs_1 | Dependency License
wdqs_1 | ICU http://source.icu-project.org/repos/icu/icu/trunk/license.html
wdqs_1 | bigdata-ganglia http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | blueprints-core https://github.com/tinkerpop/blueprints/blob/master/LICENSE.txt
wdqs_1 | colt http://acs.lbl.gov/software/colt/license.html
wdqs_1 | commons-codec http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | commons-fileupload http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | commons-io http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | commons-logging http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | dsiutils http://www.gnu.org/licenses/lgpl-2.1.html
wdqs_1 | fastutil http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | flot http://www.opensource.org/licenses/mit-license.php
wdqs_1 | high-scale-lib http://creativecommons.org/licenses/publicdomain
wdqs_1 | httpclient http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | httpclient-cache http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | httpcore http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | httpmime http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | jackson-core http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | jetty http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | jquery https://github.com/jquery/jquery/blob/master/MIT-LICENSE.txt
wdqs_1 | jsonld https://raw.githubusercontent.com/jsonld-java/jsonld-java/master/LICENCE
wdqs_1 | log4j http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | lucene http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | nanohttp http://elonen.iki.fi/code/nanohttpd/#license
wdqs_1 | rexster-core https://github.com/tinkerpop/rexster/blob/master/LICENSE.txt
wdqs_1 | river http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | semargl https://github.com/levkhomich/semargl/blob/master/LICENSE
wdqs_1 | servlet-api http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 | sesame http://www.openrdf.org/download.jsp
wdqs_1 | slf4j http://www.slf4j.org/license.html
wdqs_1 | zookeeper http://www.apache.org/licenses/LICENSE-2.0.html
wdqs_1 |
wdqs_1 | 15:55:11.446 [main] WARN com.bigdata.rdf.ServiceProviderHook IP: UA: - Running.
wdqs_1 | 15:55:11.587 [main] INFO o.w.q.r.b.mwapi.MWApiServiceFactory IP: UA: - Loading MWAPI service configuration from ./mwservices.json
wdqs_1 | 15:55:12.153 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.chemspider.com/
wdqs_1 | 15:55:12.153 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.ncbi.nlm.nih.gov/pubchem/compound/CID
wdqs_1 | 15:55:12.154 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:12.156 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:12.157 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/direct-normalized/P
wdqs_1 | 15:55:12.158 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/qualifier/value-normalized/P
wdqs_1 | 15:55:12.158 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/reference/value-normalized/P
wdqs_1 | 15:55:12.158 [com.bigdata.journal.Journal.executorService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/statement/value-normalized/P
wdqs_1 | 15:55:12.242 [main] INFO o.w.q.r.b.mwapi.MWApiServiceFactory IP: UA: - Registered 4 services.
wdqs_1 | 15:55:12.337 [main] INFO o.w.q.r.b.WikibaseContextListener IP: UA: - Wikibase services initialized.
wdqs_1 | 15:55:12.619 [main] INFO o.w.q.r.b.t.ThrottlingFilter IP: UA: - ThrottlingFilter MBean registered as org.wikidata.query.rdf.blazegraph.throttling.ThrottlingFilter:filterName=throttling-filter.
wdqs_1 | 2018-04-06 15:55:12.737:INFO:oejsh.ContextHandler:main: Started o.e.j.w.WebAppContext@5aaa6d82{/bigdata,file:/tmp/jetty-0.0.0.0-9999-blazegraph-service-0.3.0.war-_bigdata-any-1533619962400706239.dir/webapp/,AVAILABLE}{file:/wdqs/blazegraph-service-0.3.0.war}
wdqs_1 | 2018-04-06 15:55:12.738:WARN:oejsh.RequestLogHandler:main: !RequestLog
wdqs_1 | 2018-04-06 15:55:12.789:INFO:oejs.ServerConnector:main: Started ServerConnector@53a41cf8{HTTP/1.1}{0.0.0.0:9999}
wdqs_1 | 2018-04-06 15:55:12.791:INFO:oejs.Server:main: Started @18975ms
wdqs-updater_1 | wait-for-it.sh: wdqs.svc:9999 is available after 17 seconds
wdqs-updater_1 | Updating via http://wdqs.svc:9999/bigdata/namespace/wdq/sparql
wdqs-updater_1 | OpenJDK 64-Bit Server VM warning: Cannot open file /var/log/wdqs/wdqs-updater_jvm_gc.pid8.log due to No such file or directory
wdqs-updater_1 |
wdqs-updater_1 | #logback.classic pattern: %d{HH:mm:ss.SSS} [%thread] %-5level %logger{36} - %msg%n
wdqs-updater_1 | 15:55:16.540 [main] INFO o.w.q.r.t.change.RecentChangesPoller - Got 3 changes, from Q3@10@20180326193216|10 to P2@12@20180330223802|12
wdqs_1 | 15:55:17.101 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.chemspider.com/
wdqs_1 | 15:55:17.102 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.ncbi.nlm.nih.gov/pubchem/compound/CID
wdqs_1 | 15:55:17.102 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:17.102 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:17.102 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/direct-normalized/P
wdqs_1 | 15:55:17.102 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/qualifier/value-normalized/P
wdqs_1 | 15:55:17.102 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/reference/value-normalized/P
wdqs_1 | 15:55:17.102 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService1] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/statement/value-normalized/P
wdqs_1 | 15:55:17.513 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.chemspider.com/
wdqs_1 | 15:55:17.513 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.ncbi.nlm.nih.gov/pubchem/compound/CID
wdqs_1 | 15:55:17.513 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:17.513 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:17.516 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/direct-normalized/P
wdqs_1 | 15:55:17.516 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/qualifier/value-normalized/P
wdqs_1 | 15:55:17.516 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/reference/value-normalized/P
wdqs_1 | 15:55:17.517 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService2] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/statement/value-normalized/P
wdqs_1 | 15:55:17.644 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.chemspider.com/
wdqs_1 | 15:55:17.644 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://rdf.ncbi.nlm.nih.gov/pubchem/compound/CID
wdqs_1 | 15:55:17.645 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:17.645 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://sws.geonames.org/
wdqs_1 | 15:55:17.646 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/direct-normalized/P
wdqs_1 | 15:55:17.646 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/qualifier/value-normalized/P
wdqs_1 | 15:55:17.646 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/reference/value-normalized/P
wdqs_1 | 15:55:17.647 [com.bigdata.rdf.sail.webapp.BigdataRDFContext.queryService3] WARN c.b.rdf.internal.InlineURIHandler IP: UA: - No vocabulary entry for namespace - URIs with this namespace will not be inlined: namespace=http://wikibase.plantdata.io/prop/statement/value-normalized/P
wdqs-updater_1 | 15:55:18.482 [main] INFO org.wikidata.query.rdf.tool.Updater - Polled up to 2018-04-03T03:51:58Z at (0.0, 0.0, 0.0) updates per second and (0.0, 0.0, 0.0) milliseconds per second
wdqs-updater_1 | 15:55:19.059 [main] INFO o.w.q.r.t.change.RecentChangesPoller - Got no real changes
wdqs-updater_1 | 15:55:19.060 [main] INFO org.wikidata.query.rdf.tool.Updater - Sleeping for 10 secs
Gracefully stopping... (press Ctrl+C again to force)
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