If you type [[neutron]]s in wikicode, a link labelled "neutrons" (S included) will be created.
On that example using VE, a <nowiki/> has been added between the ]] and the final s. That may due to a wrong interpretation from Parsoid that believed it was like the wikitext but not but yes.
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If you write the equivalent of [[neutron]]s in VE, that is the wikitext you get from Parsoid. Specifically, that is <a href="neutron">neutrons</a>.
If you write instead <a href="neutron">neutron</a>s, Parsoid rescues you when changing it to wikitext by correctly putting a <nowiki /> there to stop it breaking.