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qsub by default sends jobs with `-l release=precise`, which cannot be satisfied
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Description

'm trying to run a script via de jobgrid and it doesn't run. Checking the jobqueue I see it's stuck on queued/waiting.
More details show that it can't run using default settings,
This is my crontab entry:

0 12,0 * * * qsub -m n $HOME/cleaner.sh

And these are the details of the job:

tools.ytcleaner@tools-bastion-03:~$ qstat -j 6307824
==============================================================
job_number:                 6307824
exec_file:                  job_scripts/6307824
submission_time:            Fri May 25 00:01:16 2018
owner:                      tools.ytcleaner
uid:                        52856
group:                      tools.ytcleaner
gid:                        52856
sge_o_home:                 /data/project/ytcleaner
sge_o_log_name:             tools.ytcleaner
sge_o_path:                 /usr/bin:/bin
sge_o_shell:                /bin/sh
sge_o_workdir:              /mnt/nfs/labstore-secondary-tools-project/ytcleaner
sge_o_host:                 tools-cron-01
account:                    sge
stderr_path_list:           NONE:NONE:$HOME/log/cron-tools.ytcleaner-1.err
hard resource_list:         h_vmem=256M,release=precise
mail_list:                  mbch331.wikipedia@gmail.com
notify:                     FALSE
job_name:                   cron-tools.ytcleaner-1
stdout_path_list:           NONE:NONE:/dev/null
jobshare:                   0
env_list:
script_file:                /data/project/ytcleaner/cleaner.sh
scheduling info:            (-l h_vmem=256M,release=precise) cannot run in queue "webgrid-lighttpd@tools-webgrid-lighttpd-1424.tools.eqiad.wmflabs" because job requests unknown resource (release)
                            has no permission for cluster queue "giftbot"
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1405.eqiad.wmflabs" because it offers only hc:h_vmem=0.000
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1401.eqiad.wmflabs" because it offers only hc:h_vmem=0.000
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1437.tools.eqiad.wmflabs" because it offers only hc:h_vmem=220.000M
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-generic-1403.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-generic-1404.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-generic-1401.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-generic-1402.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1413.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1407.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1441.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1431.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1428.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1406.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1411.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1408.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1425.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1402.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1411.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1427.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1417.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1414.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1410.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1406.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1418.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1404.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1415.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1426.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1439.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1419.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1416.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1409.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1413.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1424.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1428.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1422.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1432.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1405.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1426.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1425.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1434.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1401.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1410.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1403.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1415.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1412.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1407.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1427.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1435.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1430.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1436.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1402.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1421.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1429.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1417.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1414.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1433.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1442.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1440.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1420.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1404.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1416.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1418.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1423.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1409.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1419.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1408.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-exec-1438.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1421.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1412.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1420.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1422.tools.eqiad.wmflabs" because it offers only hf:release=trusty
                            (-l h_vmem=256M,release=precise) cannot run at host "tools-webgrid-lighttpd-1403.eqiad.wmflabs" because it offers only hf:release=trusty

Manually running the cleaner.sh script from command line gives no issues. Do I need to change anything to my cronjob or is something else wrong?

Event Timeline

Mbch331 created this task.May 25 2018, 5:06 AM
Restricted Application added a subscriber: Aklapper. · View Herald TranscriptMay 25 2018, 5:06 AM
zhuyifei1999 subscribed.May 25 2018, 5:18 AM

For some reason qsum defaults to release=precise (this should be fixed but idk how). Use jsub instead, or specify -l release=trusty explicitly.

Stashbot subscribed.May 25 2018, 5:31 AM

Mentioned in SAL (#wikimedia-cloud) [2018-05-25T05:31:20Z] <zhuyifei1999_> Edit /data/project/.system/gridengine/default/common/sge_request, h_vmem 256M -> 512M, release precise -> trusty T195558

zhuyifei1999 added a comment.May 25 2018, 5:32 AM

Could you test with qsub again?

Mbch331 added a comment.May 25 2018, 5:53 AM

Seems to be working.
6320389 0.30000 cron-tools tools.ytclea r 05/25/2018 05:51:12 webgrid-generi c@tools-webgrid- 1
And I get an e-mail from my script, which means it has run.

zhuyifei1999 closed this task as Resolved.May 25 2018, 6:00 AM
zhuyifei1999 claimed this task.

Please use the task queue for one-time run tasks, instead of the webgrid-genericqueue, which is meant for webservices.

zhuyifei1999 renamed this task from Cronjob stuck in jobgrid to qsub by default sends jobs with `-l release=precise`, which cannot be satisfied.May 25 2018, 6:01 AM
• Vvjjkkii renamed this task from qsub by default sends jobs with `-l release=precise`, which cannot be satisfied to 5acaaaaaaa.Jul 1 2018, 1:08 AM
• Vvjjkkii reopened this task as Open.
• Vvjjkkii removed zhuyifei1999 as the assignee of this task.
• Vvjjkkii triaged this task as High priority.
• Vvjjkkii added projects: CheckUser, Connected-Open-Heritage-Batch-uploads (RAÄ-KMB_1_2017-02), Tamil-Sites, Gamepress, Hashtags, Jade, KartoEditor, Language-2018-Apr-June, New-Editor-Experiences, Mail, TCB-Team (now WMDE-TechWish).
• Vvjjkkii updated the task description. (Show Details)
• Vvjjkkii removed a subscriber: Aklapper.
Mbch331 renamed this task from 5acaaaaaaa to qsub by default sends jobs with `-l release=precise`, which cannot be satisfied .Jul 2 2018, 9:07 AM
Mbch331 closed this task as Resolved.
Mbch331 assigned this task to zhuyifei1999.
Mbch331 raised the priority of this task from High to Needs Triage.
Mbch331 removed projects: TCB-Team (now WMDE-TechWish), Mail, New-Editor-Experiences, Language-2018-Apr-June, KartoEditor, Jade, Hashtags, Gamepress, Tamil-Sites, Connected-Open-Heritage-Batch-uploads (RAÄ-KMB_1_2017-02), CheckUser.
Mbch331 updated the task description. (Show Details)
Mbch331 added a subscriber: Aklapper.
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