The fix in T200148 (specifically https://gerrit.wikimedia.org/r/450153) added position:relative to #mw_content in the modern skin. This should be undone, it borks the coordinates system in the Modern skin. See for example https://en.wikipedia.org/wiki/New_York_City?useskin=modern — normally, the coordinates should appear higher up, in the menu bar.
As I said at T200148#4493010, the ideal solution for that would be to deal with the toolbar CSS, but this needs fixing separately.